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  5. Cba_g37834

Cba_g37834 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g37834

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00109730 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AT1G66200 ATGSR2, GLN1;2, GSR2 glutamine synthase clone F11 0.02 OrthoFinder output from all 47 species
Aop_g15854 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G000200.1 GLN1;4, Ceric.20G000200 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G070700.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g56400.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.02 OrthoFinder output from all 47 species
Lfl_g25441 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Lfl_g36217 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Mp1g24330.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase, chloroplastic OS=Chlamydomonas... 0.02 OrthoFinder output from all 47 species
Mp5g13580.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Mp6g06750.1 GLN1;4 cytosolic glutamine synthetase (GLN1) 0.01 OrthoFinder output from all 47 species
Sam_g16445 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR008147 Gln_synt_N 83 135
IPR008146 Gln_synth_cat_dom 145 379
No external refs found!