Cba_g37029 (AGL16)

Aliases : AGL16

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g37029

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00267050	AGL6,...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AMTR_s00001p00270400	AGL32, TT16,...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AMTR_s00002p00262760	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00214260	AGL66,...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
AT1G22130	AGL104	AGAMOUS-like 104	0.02	OrthoFinder output from all 47 species
AT1G77950	AGL67	AGAMOUS-like 67	0.02	OrthoFinder output from all 47 species
AT1G77980	AGL66	AGAMOUS-like 66	0.02	OrthoFinder output from all 47 species
AT3G02310	AGL4, SEP2	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT3G04100	AGL57	AGAMOUS-like 57	0.02	OrthoFinder output from all 47 species
AT3G66656	AGL91	AGAMOUS-like 91	0.02	OrthoFinder output from all 47 species
AT4G24540	AGL24	AGAMOUS-like 24	0.02	OrthoFinder output from all 47 species
AT4G37435	No alias	No description available	0.03	OrthoFinder output from all 47 species
Aev_g20345	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g11955	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33320	AGL14	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g36405	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g38673	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04197	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18421	AGL42	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0062.g035272	AGL16	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g33793	AGL14	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g47174	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.08G048300.1	AGL42, Ceric.08G048300	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G051300.1	GL19, AGL19,...	not classified & original description: pacid=50601537...	0.01	OrthoFinder output from all 47 species
Ceric.12G051800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.12G052800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.16G005300.1	AGL65, Ceric.16G005300	MADS/AGL-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.38G021500.1	AGL2, SEP1,...	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dac_g08553	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g38503	AGL42	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07431	AGL6	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10207	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01008139001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01008140001	AGL8, FUL	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01008806001	PI	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01008980001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01009393001	AGL104	RNA biosynthesis.transcriptional activation.MADS box...	0.01	OrthoFinder output from all 47 species
GSVIVT01012249001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01015649001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01019883001	GL19, AGL19	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01025945001	STK, AGL11	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01036549001	AGL7, AP1	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01037022001	AGL62	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01037024001	AGL62	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
Gb_12778	No alias	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Gb_34101	SVP, AGL22	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os01g10504.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os01g66290.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os02g45770.1	AGL6, LOC_Os02g45770	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os03g11614.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os05g11380.1	STK, AGL11,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os05g34940.1	PI, LOC_Os05g34940	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os06g06750.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os06g11970.1	AGL66, LOC_Os06g11970	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38590.1	AGL104, LOC_Os08g38590	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Len_g41287	AGL1, SHP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g04547	AGL10, CAL1, CAL	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g13167	AGL42	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g25148	AGL10, CAL1, CAL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432817g0010	SVP, AGL22	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_16120g0010	AGL14	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_607627g0010	SOC1, AGL20, ATSOC1	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_886752g0010	SOC1, AGL20, ATSOC1	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_9841429g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Msp_g26027	AGL30	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g42364	STK, AGL11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16570	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19814	AGL10, CAL1, CAL	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g07434	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003425	AGL15	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009704	ANR1, AGL44	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013783	STK, AGL11	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g13249	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27238	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29030	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g093960.3.1	AGL6, Solyc01g093960	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc01g106710.1.1	AGL62, Solyc01g106710	component MED19 of head module of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Solyc02g065730.2.1	AGL8, FUL, Solyc02g065730	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc02g091550.2.1	AGL21, Solyc02g091550	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc03g114830.3.1	AGL8, FUL, Solyc03g114830	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc04g078300.3.1	AGL104, Solyc04g078300	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc06g064840.4.1	STK, AGL11,...	no description available(sp\|f6i457\|ag11c_vitvi : 172.0)	0.02	OrthoFinder output from all 47 species
Solyc11g010570.2.1	SVP, AGL22,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc12g056460.3.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Spa_g06302	AGL6	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g53600	AGL42	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e015447_P001	AGL6, Zm00001e015447	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e019029_P001	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e022819_P002	AGL16, Zm00001e022819	transcription factor (MADS/AGL)	0.01	OrthoFinder output from all 47 species
Zm00001e030373_P001	AGL10, CAL1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e030839_P001	AGL66, Zm00001e030839	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e039774_P001	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	50	92
IPR002487	TF_Kbox	122	194

External Links

No external refs found!

Cba_g37029 (AGL16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation