Cba_g36139


Description : regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex & original description: none


Gene families : OG0003183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g36139

Target Alias Description ECC score Gene Family Method Actions
AT5G08390 No alias Transducin/WD40 repeat-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G23430 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g061125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08631 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Aev_g38939 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010636 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Lfl_g37546 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species
MA_12868g0010 No alias regulatory component of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002424 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Solyc02g021360.3.1 Solyc02g021360 regulatory component of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species
Solyc02g078800.4.1 Solyc02g078800 regulatory component of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species
Spa_g17543 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.01 OrthoFinder output from all 47 species
Zm00001e006531_P001 Zm00001e006531 regulatory component of Katanin ATP-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 50 85
IPR001680 WD40_repeat 90 127
IPR001680 WD40_repeat 7 42
IPR001680 WD40_repeat 133 169
IPR001680 WD40_repeat 173 211
No external refs found!