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  5. Lfl_g34230

Lfl_g34230


Description : atypical PTP phosphatase *(PFA-DSP) & original description: none


Gene families : OG0001443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34230

Target Alias Description ECC score Gene Family Method Actions
AT1G05000 No alias Phosphotyrosine protein phosphatases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g050676 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16381 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02058 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030509001 No alias Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g02759 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g049560.3.1 Solyc07g049560 atypical dual-specificity phosphatase (PFA-DSP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR004861 Siw14-like 95 254
No external refs found!