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  5. Cba_g35098

Cba_g35098


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35098

Target Alias Description ECC score Gene Family Method Actions
Adi_g001800 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g088547 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g58974 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g09867 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g33173 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g77185 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_36674 No alias component RPL27 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os10g41470.1 LOC_Os10g41470 component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp4g23910.1 No alias component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ore_g04282 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g02687 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g20200 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g22587 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g20317 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g28095 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo166700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g073300.1.1 Solyc06g073300 component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g03073 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g24106 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 80 163
No external refs found!