Cba_g35069 (PEN3, ABCG36, ATPDR8,...)

Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : not classified & original description: none

Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g35069
Cluster	HCCA: Cluster_296

Target	Alias	Description	ECC score	Gene Family Method
Aop_g19902	PDR6, ATPDR6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g43718	PDR6, ATPDR6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g58126	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g57854	PDR6, ATPDR6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g67685	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10429293g0010	PEN3, ABCG36,...	no description available(sp\|h6ws93\|pdr1_petax : 154.0)	0.04	OrthoFinder output from all 47 species
MA_218328g0010	PEN3, ABCG36,...	ABC transporter G family member 36 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_396327g0010	PIS1, ABCG37,...	ABC transporter G family member 37 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Nbi_g41910	PDR6, ATPDR6	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g61713	PDR6, ATPDR6	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	70	178
IPR029481	ABC_trans_N	2	45

External Links

No external refs found!