Aliases : MUR10, ATCESA7, CESA7, IRX3
Description : not classified & original description: none
Gene families : OG0008229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008229_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g34263 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g048672 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g050025 | MUR10, ATCESA7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g065409 | CESA4, NWS2, IRX5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g102733 | IXR1, CEV1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g102734 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g33288 | IXR1, CEV1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s1899.g107901 | ATCSLD5, CSLD5, SOS6 | not classified & original description: CDS=1-600 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g33746 | IXR1, CEV1,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_10435639g0020 | IXR1, CEV1,... | Probable cellulose synthase A catalytic subunit 6... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g29956 | IXR1, CEV1,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g48283 | IXR1, CEV1,... | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Spa_g52552 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEA | Interproscan |
BP | GO:0030244 | cellulose biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005150 | Cellulose_synth | 1 | 125 |
No external refs found! |