Aliases : RPL4
Description : component *(uL4c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0007896 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007896_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00221060 | RPL4,... | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
AT1G07320 | RPL4 | ribosomal protein L4 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g078975 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g05983 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g13415 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene15325.t1 | RPL4, Aspi01Gene15325 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0056.g034220 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G057300.1 | RPL4, Ceric.09G057300 | component *(uL4c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre11.g479500 | RPL4 | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024788001 | RPL4 | 50S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum | 0.04 | OrthoFinder output from all 47 species | |
Gb_03469 | RPL4 | component psRPL4 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g15870.1 | RPL4, LOC_Os03g15870 | component psRPL4 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Len_g13257 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g01030 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g18940.1 | RPL4 | component psRPL4 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
Ore_g08496 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g061900.3.1 | RPL4, Solyc07g061900 | component psRPL4 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
Spa_g08728 | RPL4 | component *(uL4c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e001165_P001 | RPL4, Zm00001e001165 | component psRPL4 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002136 | Ribosomal_L4/L1e | 111 | 299 |
No external refs found! |