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  5. Cba_g33579

Cba_g33579


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g33579

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00254660 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G00200 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G51590 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g057354 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11623 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12528 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07653 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31583 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18260 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g57820.1 LOC_Os02g57820 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g06268 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21961 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07470 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57591 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010139 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc08g008030.3.1 Solyc08g008030 AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g077030.4.1 Solyc08g077030 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e031026_P002 Zm00001e031026 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 137 246
No external refs found!