Cba_g32641 (PEPC1, ATPEPC1, ATPPC1, PPC1)

Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g32641

Target	Alias	Description	ECC score	Gene Family Method
Ceric.37G026100.1	ATPPC3, PPC3,...	EC_4.1 carbon-carbon lyase & original description:...	0.02	OrthoFinder output from all 47 species
GSVIVT01011979001	ATPPC4, PPC4	Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate...	0.02	OrthoFinder output from all 47 species
LOC_Os01g54230.1	ATPPC4, PPC4,...	Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Lfl_g06687	PEPC1, ATPEPC1,...	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15379	PEPC1, ATPEPC1,...	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g062530.3.1	ATPPC3, PPC3,...	PEP carboxylase	0.02	OrthoFinder output from all 47 species
Solyc12g014250.2.1	PEPC1, ATPEPC1,...	PEP carboxylase	0.02	OrthoFinder output from all 47 species
Zm00001e029018_P001	ATPPC3, PPC3,...	PEP carboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEA	Interproscan
BP	GO:0015977	carbon fixation	IEA	Interproscan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021135	PEP_COase	40	967

External Links

No external refs found!