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  5. Cba_g31962

Cba_g31962


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g31962

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.02 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Ala_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_33802 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10425865g0020 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10428569g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_178158g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_99743g0020 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Pir_g40622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Spa_g38797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 115
No external refs found!