Cba_g31223 (SAR1, ATSAR1B,...)

Aliases : SAR1, ATSAR1B, ATSAR1, SAR1B, ATSARA1B

Description : small GTPase *(Sar1) & original description: none

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g31223
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Als_g07589	SAR1, ATSAR1B,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g10715	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14905	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23865	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g10798	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001044	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: CDS=124-705	0.03	OrthoFinder output from all 47 species
Sam_g08264	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g060130.3.1	Solyc01g060130	GTPase (Sar1)	0.02	OrthoFinder output from all 47 species
Spa_g24853	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005048	signal sequence binding	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	48	232

External Links

No external refs found!