- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MAG1, VPS29, ATVPS29
Description : component *(VPS29) of Retromer protein recycling complex & original description: none
Gene families : OG0006685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g29489 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00251310 | MAG1, VPS29,... | Vesicle trafficking.endomembrane trafficking.protein... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G47810 | MAG1, VPS29, ATVPS29 | Calcineurin-like metallo-phosphoesterase superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06887 | MAG1, VPS29, ATVPS29 | component *(VPS29) of Retromer protein recycling complex... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024654 | Calcineurin-like_PHP_lpxH | 45 | 198 |
| No external refs found! |