- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(uL10) of organelle large ribosomal-subunit proteome & original description: none
Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g27816 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00218670 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G13510 | No alias | Ribosomal protein L10 family protein | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g04789 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g52226 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05054 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G078900.1 | Ceric.20G078900 | component *(uL10c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Cre06.g272850 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21730 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g17580.1 | LOC_Os03g17580 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g03030.1 | LOC_Os05g03030 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13372 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g00434 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g07300.1 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g00675 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g30194 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_1330V3.1 | Pp3c1_1330 | Ribosomal protein L10 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008577 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo233811 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009540.1.1 | Solyc04g009540 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24954 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e001284_P001 | Zm00001e001284 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038440_P001 | Zm00001e038440 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001790 | Ribosomal_L10P | 63 | 146 |
| No external refs found! |