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  5. Cba_g27720

Cba_g27720


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27720

Target Alias Description ECC score Gene Family Method Actions
Adi_g036534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.03 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037259001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72320.1 LOC_Os01g72320 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Pnu_g31429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g065120.3.1 Solyc11g065120 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e015467_P001 Zm00001e015467 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 652 718
IPR013591 Brevis_radix_dom 1118 1173
IPR001849 PH_domain 15 124
IPR027988 BRX_N 917 950
IPR000408 Reg_chr_condens 601 648
IPR000408 Reg_chr_condens 377 428
IPR000408 Reg_chr_condens 326 374
IPR000408 Reg_chr_condens 547 596
IPR000408 Reg_chr_condens 495 544
IPR000408 Reg_chr_condens 432 480
No external refs found!