Cba_g27395 (TRZ4)

Aliases : TRZ4

Description : EC_3.1 hydrolase acting on ester bond & original description: none

Gene families : OG0002827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002827_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g27395

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00038090	TRZ4,...	RNA processing.ribonuclease activities.RNase Z endoribonuclease	0.02	OrthoFinder output from all 47 species
AT3G16260	TRZ4	tRNAse Z4	0.03	OrthoFinder output from all 47 species
Ceric.27G032400.1	TRZ4, Ceric.27G032400	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.31G069800.1	TRZ4, Ceric.31G069800	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01017040001	TRZ4	RNA processing.ribonuclease activities.RNase Z endoribonuclease	0.04	OrthoFinder output from all 47 species
MA_15442g0010	TRZ3	endoribonuclease (RNase Z)	0.02	OrthoFinder output from all 47 species
Mp7g11230.1	TRZ3	endoribonuclease (RNase Z)	0.02	OrthoFinder output from all 47 species
Ore_g37231	TRZ4	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019311	TRZ4	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027794	tRNase_Z_dom	142	195

External Links

No external refs found!