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  5. Cba_g27391

Cba_g27391


Description : beta-L-arabinopyranosidase *(APSE) & original description: none


Gene families : OG0004732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004732_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27391

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00232770 evm_27.TU.AmTr_v1... Alpha-galactosidase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene36698.t1 Aspi01Gene36698 beta-L-arabinopyranosidase *(APSE) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g33420.1 LOC_Os01g33420 Alpha-galactosidase OS=Cyamopsis tetragonoloba... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041233 Melibiase_C 569 670
IPR002241 Glyco_hydro_27 196 381
No external refs found!