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  5. Cba_g27347

Cba_g27347 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233520 CLC-A, ATCLC-A,... Chloride channel protein CLC-a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00233550 ATCLC-B, CLC-B,... Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Aev_g05149 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aev_g41935 ATCLC-B, CLC-B anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39432.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39433.t1 Aspi01Gene39433 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51484.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001126.4 No alias Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g23187 ATCLC-C, CLC-C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37323 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Gb_17660 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Len_g44129 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
MA_111390g0010 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species
Ore_g04555 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ore_g12404 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Pnu_g30106 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ppi_g61152 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016309 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Sam_g39701 No alias anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Solyc01g103140.3.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Spa_g12049 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 166 583
IPR000644 CBS_dom 730 778
No external refs found!