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  5. Cba_g27145

Cba_g27145


Description : not classified & original description: none


Gene families : OG0002474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27145

Target Alias Description ECC score Gene Family Method Actions
AT1G31600 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
AT1G36310 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Adi_g113533 No alias component *(TRM9) of TRM9-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species
Aob_g04115 No alias component *(TRM9) of TRM9-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species
Ehy_g14737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435732g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo78643 No alias Alkylated DNA repair protein ALKBH8 homolog... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027450 AlkB-like 167 347
No external refs found!