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  5. Cba_g26644

Cba_g26644


Description : component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent RNase P complex & original description: none


Gene families : OG0000714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26644

Target Alias Description ECC score Gene Family Method Actions
AT1G76010 No alias Alba DNA/RNA-binding protein 0.02 OrthoFinder output from all 47 species
Als_g07093 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 OrthoFinder output from all 47 species
Als_g26617 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Aob_g09426 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os03g06980.1 LOC_Os03g06980 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 OrthoFinder output from all 47 species
Len_g03111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49055 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 OrthoFinder output from all 47 species
Ore_g09780 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 OrthoFinder output from all 47 species
Pir_g15445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26006 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 96 160
No external refs found!