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  5. Cba_g26604

Cba_g26604 (ATICE1, ICE1, SCRM)


Aliases : ATICE1, ICE1, SCRM

Description : bHLH-type transcription factor & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26604

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.04 OrthoFinder output from all 47 species
Als_g51365 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14438 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02958 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15581 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08866 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo77288 SCRM2, ICE2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Spa_g04208 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 62 104
No external refs found!