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  5. Cba_g26177

Cba_g26177 (PBC1)


Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26177

Target Alias Description ECC score Gene Family Method Actions
Aev_g00417 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cre06.g267500 PBC1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Dcu_g35364 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Gb_09326 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os02g08520.1 PBC1, LOC_Os02g08520 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
LOC_Os06g43570.1 PBC1, LOC_Os06g43570 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Lfl_g00669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
MA_70161g0010 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp7g15370.1 PBC1 component beta type-3 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Sam_g51100 No alias beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e030465_P001 PBC1, Zm00001e030465 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 188
No external refs found!