1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g25240

Cba_g25240 (FMA)


Aliases : FMA

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00198490 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00081740 MUTE,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g10535 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10924 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42701 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02051 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.24G025300.1 FMA, Ceric.24G025300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g21962 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021074001 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_01096 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_17233 FMA transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os03g03000.1 LOC_Os03g03000 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g11887 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_141469g0010 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_57244g0010 FMA transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pir_g66099 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01150 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012172 FMA bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g07999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053660.3.1 FMA, Solyc05g053660 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc09g091760.3.1 FMA, Solyc09g091760 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e003394_P001 Zm00001e003394 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e026643_P001 FMA, Zm00001e026643 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 332 383
No external refs found!