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  5. Cba_g24867

Cba_g24867


Description : not classified & original description: none


Gene families : OG0007552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24867
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g001525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01070 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g25678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0284.g063080 No alias not classified & original description: CDS=127-786 0.04 OrthoFinder output from all 47 species
Ceric.30G067900.1 Ceric.30G067900 not classified & original description: pacid=50608480... 0.04 OrthoFinder output from all 47 species
Dac_g04917 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g48220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_04701 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g47970.1 LOC_Os06g47970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g13950.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017898 No alias not classified & original description: CDS=1-576 0.07 OrthoFinder output from all 47 species
Sam_g09662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!