Cba_g24671 (EBP1, ATEBP1, ATG2)

Aliases : EBP1, ATEBP1, ATG2

Description : pre-60S ribosomal-subunit proteome export factor *(ARX1) & original description: none

Gene families : OG0003188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g24671

Target	Alias	Description	ECC score	Gene Family Method	Actions
Adi_g024947	EBP1, ATEBP1, ATG2	pre-60S ribosomal-subunit proteome export factor *(ARX1)...	0.02	OrthoFinder output from all 47 species
Als_g32738	EBP1, ATEBP1, ATG2	pre-60S ribosomal-subunit proteome export factor *(ARX1)...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000994	Pept_M24	22	225

External Links

No external refs found!