Cba_g24367 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24367

Target Alias Description ECC score Gene Family Method Actions
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g040866 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06833 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30625 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07228 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15165 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30402 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08575 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g45843 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.05 OrthoFinder output from all 47 species
LOC_Os03g49930.1 LOC_Os03g49930 Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Lfl_g06743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18381 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g45358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005530 CRR22 not classified & original description: CDS=1-2547 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 OrthoFinder output from all 47 species
Solyc02g094480.4.1 Solyc02g094480 RNA editing factor (MEF14) 0.03 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011748_P001 LPA66, Zm00001e011748 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 69 90
IPR002885 Pentatricopeptide_repeat 30 56
No external refs found!