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  5. Cba_g23984

Cba_g23984 (PRT1)


Aliases : PRT1

Description : type-II-residues E3 ubiquitin ligase *(PRT1) & original description: none


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23984

Target Alias Description ECC score Gene Family Method Actions
Als_g33512 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g04182 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11935 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Gb_36123 PRT1 type-II-residues E3 ubiquitin ligase (PRT1) 0.03 OrthoFinder output from all 47 species
Ore_g19957 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01606 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07790 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 289 327
No external refs found!