Cba_g23428


Description : not classified & original description: none


Gene families : OG0008971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008971_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23428

Target Alias Description ECC score Gene Family Method Actions
Adi_g017951 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g118719 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aev_g21979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27130 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g40894 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g25453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25163 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g23506 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g46820 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g55537 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g59271 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g63544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008174 mRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!