1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g23205

Cba_g23205 (emb2726)


Aliases : emb2726

Description : not classified & original description: none


Gene families : OG0003614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003614_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23205
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Adi_g089954 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108527 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19464 emb2726 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g26890 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30891 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g17834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05824 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63156.t1 emb2726, Aspi01Gene63156 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045909 emb2726 not classified & original description: CDS=1-1431 0.05 OrthoFinder output from all 47 species
Ceric.12G003500.1 emb2726, Ceric.12G003500 not classified & original description: pacid=50600991... 0.02 OrthoFinder output from all 47 species
Ceric.32G048200.1 emb2726, Ceric.32G048200 not classified & original description: pacid=50597994... 0.05 OrthoFinder output from all 47 species
Dac_g28821 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g22164 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22898 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27297 emb2726 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g08036 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g04910 emb2726 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g02523 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65444 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57412 emb2726 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000982 emb2726 not classified & original description: CDS=1-1401 0.05 OrthoFinder output from all 47 species
Sam_g36866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10898 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14739 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 270 335
IPR003029 S1_domain 155 221
No external refs found!