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  5. Cba_g23166

Cba_g23166 (GI, FB)


Aliases : GI, FB

Description : regulatory protein *(GIGANTEA) of zeitlupe-mediated photoperception & original description: none


Gene families : OG0006226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23166

Target Alias Description ECC score Gene Family Method Actions
AT1G22770 GI, FB gigantea protein (GI) 0.03 OrthoFinder output from all 47 species
Aev_g03384 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species
Aob_g02390 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
Dcu_g04976 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species
Mp1g13750.1 GI, FB GIGANTEA zeitlupe-mediated photoperception regulator protein 0.02 OrthoFinder output from all 47 species
Pir_g15045 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species
Pnu_g24954 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000573 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!