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  5. Cba_g23107

Cba_g23107 (NTMC2T1.3, SYT3,...)


Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC

Description : not classified & original description: none


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23107

Target Alias Description ECC score Gene Family Method Actions
Ala_g10056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G009700.1 Ceric.31G009700 not classified & original description: pacid=50574923... 0.04 OrthoFinder output from all 47 species
Dac_g26299 SRC2, (AT)SRC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034164001 No alias Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
Mp1g14990.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 130 221
IPR000008 C2_dom 4 97
No external refs found!