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  5. Cba_g22723

Cba_g22723 (TRO)


Aliases : TRO

Description : component *(TRO/ASH2) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0002961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22723

Target Alias Description ECC score Gene Family Method Actions
Aop_g70704 TRO component *(TRO/ASH2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Ceric.12G085100.1 TRO, Ceric.12G085100 component *(TRO/ASH2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Ehy_g03823 TRO component *(TRO/ASH2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Ore_g38049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29365 TRO component *(TRO/ASH2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Ppi_g55752 TRO component *(TRO/ASH2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Solyc11g065370.3.1 TRO, Solyc11g065370 component ASH2 of COMPASS histone trimethylation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003877 SPRY_dom 1097 1171
No external refs found!