Cba_g22237 (RAP2.4)

Aliases : RAP2.4

Description : subgroup ERF-I transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g22237

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09757	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g36155	Rap2.6L	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g33790	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.10G079000.1	ATERF-9, ERF9,...	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.28G005200.1	DEAR1, CEJ1,...	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000093.224	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dac_g37693	No alias	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Dcu_g13644	ERF-1, ATERF-1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g17033	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.05	OrthoFinder output from all 47 species
Dcu_g45380	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g02890	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.05	OrthoFinder output from all 47 species
Dde_g47255	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016684001	RAP2.12	Ethylene-responsive transcription factor RAP2-12...	0.03	OrthoFinder output from all 47 species
Gb_17988	RAP2.9, DEAR5	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_34285	HRD	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
LOC_Os01g10370.1	tny, LOC_Os01g10370	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os02g09650.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g57340.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g25260.1	ATERF3, ERF3,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g47590.1	ATERF3, ERF3,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os08g31580.1	RAP2.4, LOC_Os08g31580	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
LOC_Os09g20350.1	RAP2.4, LOC_Os09g20350	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_113446g0010	ORA47	transcription factor (DREB)	0.08	OrthoFinder output from all 47 species
Ore_g07819	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g07820	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20460	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g28637	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g29062	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g18798	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc03g093540.1.1	Solyc03g093540	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Solyc03g116610.3.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.03	OrthoFinder output from all 47 species
Zm00001e004048_P002	RAP2.12, Zm00001e004048	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e019159_P001	ERF110, Zm00001e019159	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e030090_P001	DEAR3, Zm00001e030090	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	278	326

External Links

No external refs found!

Cba_g22237 (RAP2.4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation