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  5. Cba_g20740

Cba_g20740 (SE)


Aliases : SE

Description : component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex & original description: none


Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20740

Target Alias Description ECC score Gene Family Method Actions
Dcu_g51621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027348001 SE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_37971 SE C2H2 zinc finger transcription factor. component SERRATE... 0.04 OrthoFinder output from all 47 species
Lfl_g02072 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Ppi_g62657 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
Spa_g54768 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021933 SERRATE/Ars2_N 195 279
No external refs found!