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  5. Cba_g20593

Cba_g20593 (PEPC1, ATPEPC1, ATPPC1, PPC1)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1

Description : not classified & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20593

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01523.t1 PEPC1, ATPEPC1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09638.t1 ATPPC3, PPC3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18344.t1 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28192.t1 PEPC1, ATPEPC1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47988.t1 ATPPC4, PPC4,... PEP carboxylase *(PPC) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010453 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: CDS=306-3104 0.05 OrthoFinder output from all 47 species
Ehy_g29108 ATPPC3, PPC3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_22236 ATPPC3, PPC3 Phosphoenolpyruvate carboxylase OS=Picea abies... 0.03 OrthoFinder output from all 47 species
LOC_Os08g27840.1 PEPC1, ATPEPC1,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Pp3c3_11630V3.1 Pp3c3_11630 phosphoenolpyruvate carboxylase 1 0.02 OrthoFinder output from all 47 species
Ppi_g02380 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021135 PEP_COase 2 225
No external refs found!