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  5. Cba_g20193

Cba_g20193


Description : not classified & original description: none


Gene families : OG0000318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20193
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Adi_g003289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G117900.1 Ceric.01G117900 not classified & original description: pacid=50591132... 0.02 OrthoFinder output from all 47 species
Ceric.37G038200.1 Ceric.37G038200 not classified & original description: pacid=50615928... 0.04 OrthoFinder output from all 47 species
Len_g32936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g39185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 69 150
No external refs found!