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  5. Cba_g19527

Cba_g19527 (CSY2)


Aliases : CSY2

Description : citrate synthase & original description: none


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19527
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G42790 CSY3 citrate synthase 3 0.02 OrthoFinder output from all 47 species
Ala_g09201 CSY3 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G069400.1 CSY3, Ceric.01G069400 citrate synthase & original description: pacid=50592334... 0.02 OrthoFinder output from all 47 species
Pir_g11695 CSY2 citrate synthase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019351 CSY3 citrate synthase & original description: CDS=142-1683 0.02 OrthoFinder output from all 47 species
Sam_g17186 No alias citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g011000.2.1 CSY2, Solyc12g011000 citrate synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 97 465
No external refs found!