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  5. Cba_g19479

Cba_g19479


Description : atypical PTP phosphatase *(PFA-DSP) & original description: none


Gene families : OG0001443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19479

Target Alias Description ECC score Gene Family Method Actions
Aob_g14943 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02058 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g53160.1 LOC_Os02g53160 atypical dual-specificity phosphatase (PFA-DSP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g05020.2 LOC_Os09g05020 atypical dual-specificity phosphatase (PFA-DSP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g23190.1 LOC_Os12g23190 atypical dual-specificity phosphatase (PFA-DSP) 0.04 OrthoFinder output from all 47 species
Pnu_g10346 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004861 Siw14-like 63 213
No external refs found!