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  5. Cba_g19260

Cba_g19260


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00039680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AT1G76590 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT3G60670 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G17900 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g076321 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04112 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57143 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23038 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G037900.1 Ceric.34G037900 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g29417 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Gb_01198 No alias transcription factor (PLATZ) 0.01 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os06g41930.2 LOC_Os06g41930 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_8936494g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g06190.1 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Msp_g01454 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13349 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12568 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15080 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g061240.4.1 Solyc06g061240 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Spa_g21761 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 74 145
No external refs found!