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  5. Cba_g18339

Cba_g18339


Description : not classified & original description: none


Gene families : OG0002169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18339
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Adi_g015456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34101.t1 Aspi01Gene34101 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G021400.1 Ceric.14G021400 not classified & original description: pacid=50634518... 0.04 OrthoFinder output from all 47 species
Dde_g25687 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g21310.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g19027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002358 No alias not classified & original description: CDS=9-1268 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009264 No alias not classified & original description: CDS=1-2037 0.02 OrthoFinder output from all 47 species
Sam_g09080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP PNGGO:0008104 protein localization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!