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  5. Cba_g17679

Cba_g17679


Description : component *(ADA1) of SAGA transcription co-activator complex & original description: none


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17679

Target Alias Description ECC score Gene Family Method Actions
Als_g09351 No alias component *(ADA1) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Als_g26308 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cba_g32594 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Cba_g39163 No alias component *(ADA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Dac_g03362 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Lfl_g02173 No alias component *(ADA1) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Lfl_g04097 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pir_g11294 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pir_g19503 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000315 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012682 No alias component *(ADA1) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Sam_g18095 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Spa_g11446 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Zm00001e003039_P001 Zm00001e003039 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 68 386
No external refs found!