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  5. Cba_g17549

Cba_g17549


Description : not classified & original description: none


Gene families : OG0004124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17549
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT5G39970 No alias catalytics 0.05 OrthoFinder output from all 47 species
Ceric.27G037200.1 Ceric.27G037200 not classified & original description: pacid=50605244... 0.02 OrthoFinder output from all 47 species
Dac_g09277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008086001 No alias HIPL1 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26293 No alias HIPL1 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g48540.1 LOC_Os03g48540 HIPL1 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012413 No alias not classified & original description: CDS=268-2490 0.03 OrthoFinder output from all 47 species
Solyc03g113490.3.1 Solyc03g113490 HIPL1 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR012938 Glc/Sorbosone_DH 227 534
No external refs found!