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  5. Cba_g17500

Cba_g17500


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17500
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Aev_g37051 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23786 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05499.t1 Aspi01Gene05499 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0120.g046757 No alias subfamily ABCG transporter & original description: CDS=1-2250 0.04 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.14G055400.1 Ceric.14G055400 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08003 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23513 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04073 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os05g31910.2 LOC_Os05g31910 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426701g0030 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g13417 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c9_18880V3.1 Pp3c9_18880 ABC-2 type transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110 No alias subfamily ABCG transporter & original description: CDS=1-2232 0.04 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 427 635
IPR003439 ABC_transporter-like_ATP-bd 110 262
No external refs found!