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Aliases : CYCD1;1, ATCYCD1;1
Description : regulatory protein *(CYCD) of cell cycle & original description: none
Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g16892 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00148150 | CYCD1;1,... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00072p00074880 | CYCD6;1,... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00190p00017930 | ATCYCD2;1,... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| AT1G70210 | CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | 0.05 | OrthoFinder output from all 47 species | |
| AT5G67260 | CYCD3;2 | CYCLIN D3;2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004785 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g006708 | CYCD4;2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034336 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05661 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g15264 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20231 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g20505 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22032 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g23134 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03626 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11704 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g12082 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g13442 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g19518 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g19978 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g47164 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g18668 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g31334 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35995 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g68494 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene22554.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene39255.t1 | ATCYCD2;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene51365.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene60777.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene72259.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g00990 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g16891 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G016800.1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.31G027000.1 | CYCD3;3, Ceric.31G027000 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05650 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11389 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g11700 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16428 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07032 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18290 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g01468 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09761 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05487 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08150 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000125001 | CYCD5;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006022001 | CYCD1;1, ATCYCD1;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009432001 | CYCD3;3 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01034128001 | CYCD7;1, CYCD7 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34092 | CYCD1;1, ATCYCD1;1 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g10650.1 | CYCD5;1, LOC_Os03g10650 | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g42070.1 | CYCD5;1, LOC_Os03g42070 | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g12980.1 | CYCD1;1,... | cyclin (CYCD) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g02360.1 | CYCD3;3, LOC_Os09g02360 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12518 | ATCYCD2;1, CYCD2;1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09649 | CYCD4;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g10565 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429174g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_114375g0010 | CYCD1;1, ATCYCD1;1 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| MA_93221g0010 | CYCD1;1, ATCYCD1;1 | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06191 | CYCD3;2 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g08856 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g10139 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07386 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13351 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43541 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g36082 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37998 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g29651 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04462 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06303 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g10385 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g14272 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0134.g022297 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0162.g023971 | No alias | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0198.g025534 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g06392 | No alias | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16646 | No alias | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo15078 | CYCD3;3 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g006050.3.1 | CYCD1;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g087900.2.1 | ATCYCD2;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04266 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04498 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11128 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15040 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g15041 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g38227 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45652 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g00808 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g03949 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06567 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e018000_P001 | CYCD1;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033498_P001 | CYCD3;3, Zm00001e033498 | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034405_P005 | ATCYCD2;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035575_P002 | ATCYCD2;1,... | cyclin (CYCD) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016744 | transketolase or transaldolase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |