- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g16716 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g058970 | RARE1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g33897 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g24743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g37976 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g05345 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g39230 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene12870.t1 | Aspi01Gene12870 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27421.t1 | Aspi01Gene27421 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009069 | CRR22 | not classified & original description: CDS=1-1992 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023921 | No alias | not classified & original description: CDS=1-2157 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g06233 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07249 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G031300.1 | Ceric.01G031300 | not classified & original description: pacid=50591599... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.03G039400.1 | Ceric.03G039400 | not classified & original description: pacid=50571919... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.04G034400.1 | Ceric.04G034400 | not classified & original description: pacid=50632280... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28641 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Gb_08671 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g39130.1 | LOC_Os08g39130 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g02423 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_38395g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g19069 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g22363 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g23140 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37727 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48726 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09710 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g24038 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g02574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57551 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29583 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000505 | CRR2 | not classified & original description: CDS=1-1110 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011031 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11266 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g011680.4.1 | Solyc02g011680 | Pentatricopeptide repeat-containing protein At5g27110... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g43745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e013713_P001 | Zm00001e013713 | Pentatricopeptide repeat-containing protein At4g20770... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| CC | GO:0090730 | Las1 complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |