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  5. Cba_g16645

Cba_g16645


Description : not classified & original description: none


Gene families : OG0007043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16645

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00095080 evm_27.TU.AmTr_v1... Cactin OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G03910 No alias EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13... 0.02 OrthoFinder output from all 47 species
Ala_g14952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G082000.1 Ceric.14G082000 not classified & original description: pacid=50634889... 0.03 OrthoFinder output from all 47 species
Cre09.g398650 No alias Cactin OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pir_g05927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006029_P001 Zm00001e006029 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 708.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR018816 Cactin_central 223 420
IPR019134 Cactin_C 577 701
No external refs found!