1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g16130

Cba_g16130


Description : not classified & original description: none


Gene families : OG0001721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16130

Target Alias Description ECC score Gene Family Method Actions
AT1G21630 No alias Calcium-binding EF hand family protein 0.02 OrthoFinder output from all 47 species
Aev_g03379 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ala_g12845 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ala_g20697 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Als_g42942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47804 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.18G009900.1 Ceric.18G009900 component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre06.g304800 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g09745 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14795 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.08 OrthoFinder output from all 47 species
Ehy_g10505 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013392001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
GSVIVT01023872001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Gb_27596 No alias component EH of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g03830.1 LOC_Os03g03830 component EH of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g51250.1 LOC_Os06g51250 component EH of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Lfl_g02347 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Mp1g23280.1 No alias component EH of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Pnu_g09471 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Solyc02g038812.1.1 Solyc02g038812 component EH of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Solyc04g082560.4.1 Solyc04g082560 component EH of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
Zm00001e013332_P003 Zm00001e013332 component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e030779_P001 Zm00001e030779 component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e038925_P002 Zm00001e038925 component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!