1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g16087

Cba_g16087


Description : not classified & original description: none


Gene families : OG0003076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003076_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16087
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00119660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G22850 No alias SNARE associated Golgi protein family 0.11 OrthoFinder output from all 47 species
Adi_g018663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05366 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g37105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08316 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene51710.t1 Aspi01Gene51710 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0019.g015301 No alias not classified & original description: CDS=177-1319 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016028 No alias not classified & original description: CDS=239-1354 0.03 OrthoFinder output from all 47 species
Ceric.31G048100.1 Ceric.31G048100 not classified & original description: pacid=50574061... 0.05 OrthoFinder output from all 47 species
Dac_g09574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036301001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_39382 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g00596 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g12607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01439 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g05345 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g25467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15714 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g04260 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g41597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020923 No alias not classified & original description: CDS=290-1411 0.02 OrthoFinder output from all 47 species
Sam_g11711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019037_P002 Zm00001e019037 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e028596_P001 Zm00001e028596 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032816 SNARE_assoc 215 333
No external refs found!