Cba_g15943 (ATVAMP725, VAMP725)


Aliases : ATVAMP725, VAMP725

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15943

Target Alias Description ECC score Gene Family Method Actions
AT4G15780 ATVAMP724, VAMP724 vesicle-associated membrane protein 724 0.02 OrthoFinder output from all 47 species
Als_g06684 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.05 OrthoFinder output from all 47 species
Aspi01Gene30424.t1 VAMP726,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ehy_g06509 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01000524001 VAMP726, ATVAMP726 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
GSVIVT01017751001 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01028579001 ATVAMP721,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44430.2 VAMP727,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Len_g48886 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Nbi_g05177 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Pir_g01212 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Pir_g18129 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Pnu_g09066 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Spa_g08942 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Tin_g00364 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e039018_P001 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 110
IPR042855 V_SNARE_CC 129 214
No external refs found!