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  5. Cba_g15857

Cba_g15857


Description : not classified & original description: none


Gene families : OG0001556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15857

Target Alias Description ECC score Gene Family Method Actions
Adi_g022722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51337 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59461.t1 Aspi01Gene59461 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G052300.1 Ceric.28G052300 not classified & original description: pacid=50570866... 0.05 OrthoFinder output from all 47 species
Dac_g11275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g007340.3.1 Solyc10g007340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!